iRecSpot-EF

Effective Sequence Based Features for Recombination Hotspot Prediction

Enter the query sequences in FASTA format :

Recommended browser : Google Chrome or Mozilla Firefox

( Recommended step size >= 200 )



User Guidelines

  1. Recommended browser : Google Chrome or Mozilla Firefox
  2. FASTA sequence length must not be too small. (Length must be greater than 16)
  3. Maximum number of characters is 50000
  4. User can give multiple FASTA format DNA sequences (click on the Example button for example) but maximum number of characters should not exceed 50000
  5. Click on the Example button for example
  6. Click on the Reset button to reset
  7. Click on the Submit button to get the prediction results
  8. If a FASTA format is not valid, it will not give any prediction
  9. Case-insensitive : does not distinguish between lower case letter or upper case letter. (E.g. ACGT, acgt, AcGt have the similar meaning)
  10. Must use FASTA format for the DNA sequences
  11. Each FASTA format DNA sequence must start in a new line
  12. For more about FASTA format visit
  13. A FASTA format DNA sequnce is given below (user can copy and paste it in the textarea)

Example of a FASTA format:

>YDL087C 1.67 ATGTCAACTATGTCAACGCCTGCCGCAGAACAACGCAAACTCGTCGAACAGCTGATGGGCAGGAC TTCAGTTTCCGCCACAACAGGTATTCGCATCAAAAAAGAGACCTCGGACTACACGATCCAAGATC TGCAAGTCATACCTTGTTGGCGAGTGCCCCTACGACCTGTTTCAGGGCACCAACAGAGCCTGGGA AAATGCCCGCAGATGCATCTTACCAAGCATAAAATTCAGTACGAGAGAGGGTCAAGCAGGGCAAA ACGTTTCCCGAATTCGAAAGAGAATATCTGGCCATTCTATCTCGGTTGTTAATGAGTGTAATGGC CAGATATCCGTAGCACTACAAAATCTAAAACACACCGCTGAGAACGAATGAAGATTCAGCAGGTT ACCGAAGAACTAGATGTCTTGGACGTGCGGATAGGCCAATGGGACAAGAGATTGATTCTTTAATT CGTGCAGATGAAGTCAGTATGGGTATGCTACAGCAGTCAAATTACAAGAACTGATTAGTAAAAGG AAAGAAGTTGCAAAACGTGTACGAAACATACAGAAAACGTGGGCCAGAGCGCCCAGCAAAAGTTA CAGGTTTGCGAGGTGTGTGGGGCATCCTATCGCGTTTAGATACAGACAGAAGGCTTGCTGACCAC TTCTTGGGGAAGATTCATCTGGATATGTCAAGATGAGAGAGGATTATGATCGGCTAATGAAGAAT AACCGGACAACTAACGCAGCAAGACAGCTACTACACTACCCGGAAGACGCTTTGTGTA