iRecSpot-EF
Effective Sequence Based Features for Recombination Hotspot Prediction
User Guidelines
- Recommended browser : Google Chrome or Mozilla Firefox
- FASTA sequence length must not be too small. (Length must be greater than 16)
- Maximum number of characters is 50000
- User can give multiple FASTA format DNA sequences (click on the Example button for example) but maximum number of characters should not exceed 50000
- Click on the Example button for example
- Click on the Reset button to reset
- Click on the Submit button to get the prediction results
- If a FASTA format is not valid, it will not give any prediction
- Case-insensitive : does not distinguish between lower case letter or upper case letter. (E.g. ACGT, acgt, AcGt have the similar meaning)
- Must use FASTA format for the DNA sequences
- Each FASTA format DNA sequence must start in a new line
- For more about FASTA format visit
- A FASTA format DNA sequnce is given below (user can copy and paste it in the textarea)
Example of a FASTA format:
>YDL087C 1.67
ATGTCAACTATGTCAACGCCTGCCGCAGAACAACGCAAACTCGTCGAACAGCTGATGGGCAGGAC
TTCAGTTTCCGCCACAACAGGTATTCGCATCAAAAAAGAGACCTCGGACTACACGATCCAAGATC
TGCAAGTCATACCTTGTTGGCGAGTGCCCCTACGACCTGTTTCAGGGCACCAACAGAGCCTGGGA
AAATGCCCGCAGATGCATCTTACCAAGCATAAAATTCAGTACGAGAGAGGGTCAAGCAGGGCAAA
ACGTTTCCCGAATTCGAAAGAGAATATCTGGCCATTCTATCTCGGTTGTTAATGAGTGTAATGGC
CAGATATCCGTAGCACTACAAAATCTAAAACACACCGCTGAGAACGAATGAAGATTCAGCAGGTT
ACCGAAGAACTAGATGTCTTGGACGTGCGGATAGGCCAATGGGACAAGAGATTGATTCTTTAATT
CGTGCAGATGAAGTCAGTATGGGTATGCTACAGCAGTCAAATTACAAGAACTGATTAGTAAAAGG
AAAGAAGTTGCAAAACGTGTACGAAACATACAGAAAACGTGGGCCAGAGCGCCCAGCAAAAGTTA
CAGGTTTGCGAGGTGTGTGGGGCATCCTATCGCGTTTAGATACAGACAGAAGGCTTGCTGACCAC
TTCTTGGGGAAGATTCATCTGGATATGTCAAGATGAGAGAGGATTATGATCGGCTAATGAAGAAT
AACCGGACAACTAACGCAGCAAGACAGCTACTACACTACCCGGAAGACGCTTTGTGTA